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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THYM rs142291657 chr16:30090019 GA/G ZNF254 chr19:24216207-24312763:+ 0.66 7.11 2.12E-10 Box Plot
THYM rs145101968 chr9:78893217 A/AT DARS chr2:136664247-136743670:- 1.24 7.24 1.15E-10 Box Plot
THYM rs147357538 chr3:20439078 AAAAC/A CDC34 chr19:531712-542092:+ 0.69 7.11 2.2E-10 Box Plot
THYM rs147760188 chr15:101731148 CAA/C GAGE12D chrX:49306370-49313697:+ 0.45 7.23 1.25E-10 Box Plot
THYM rs148874831 chr9:78893599 GTCTA/G DARS chr2:136664247-136743670:- 1.24 7.24 1.15E-10 Box Plot
THYM rs149599403 chr4:31962124 T/C TFF2 chr21:43766466-43771237:- 0.79 7.46 3.99E-11 Box Plot
THYM rs150009404 chr3:20432732 C/CTA CDC34 chr19:531712-542092:+ 0.69 7.11 2.16E-10 Box Plot
THYM rs1546363 chr5:176601031 C/T LOC388955 chr2:63849182-63850159:- -0.56 -7.39 5.81E-11 Box Plot
THYM rs1565046 chr11:19649703 C/T TFF2 chr21:43766466-43771237:- -0.74 -7.33 7.7E-11 Box Plot
THYM rs1566886 chr16:79077219 A/G UMOD chr16:20344374-20367623:- 1.06 7.53 2.98E-11 Box Plot
THYM rs169201 chr17:44790203 A/G LOC644172 chr17:43677491-43679748:- 1.1 11.49 1.14E-19 Box Plot
THYM rs169201 chr17:44790203 A/G LRRC37A4 chr17:43578685-43595516:- -0.6 -9.57 1.4E-15 Box Plot
THYM rs16942414 chr15:89420684 G/T TFF2 chr21:43766466-43771237:- 0.66 8.05 2.37E-12 Box Plot
THYM rs17060248 chr3:59271110 T/C HNRNPCL1 chr1:12907261-12908578:- 0.46 7.54 2.73E-11 Box Plot
THYM rs17060269 chr3:59277549 C/A HNRNPCL1 chr1:12907261-12908578:- 0.43 7.28 9.75E-11 Box Plot